Last updated:
ID:
52887
Start date:
13 September 2019
Project status:
Current
Principal investigator:
Professor Chirag Patel
Lead institution:
Harvard Medical School, United States of America

We aim to predict the age of participants by using deep learning and medical images. This will allow us to identify if people who look older than they actually are are at a higher risk for the onset of different diseases.

Estimating the biological age of an individual can help predict the onset of age-related diseases or determine “biological age”. It is possible to approximate the biological age by training a model to learn the chronological age of a large cohort of individuals. The predicted age based on the model is known as biological age. The difference between the chronological and biological age is known as age acceleration.
In this project, we aim to predict the biological age of organ systems (e.g., heart, pancreas, bone, liver, and brain), from their image data. Specifically, we will first split the image samples for each tissue into a discovery, test, and validation cohort. Second, we will build a deep learning model (convolutional neural network) to predict and validate chronological age of UK Biobank participants based on the image information from these diverse tissues and we will evaluate the prediction accurate based on the test datasets. We will do this iteratively for each tissue. Third, we will estimate the co-variance of biological age between tissues – for example, is heart tissue age correlated with pancreas tissue age. Finally, we will use the new biological age as a phenotype to execute a novel genome-wide association study to determine genetic variants that are associated with our new phenotype of biological age.

Related publications

Author(s)
Caiwei Tian, Charlyne Bürki, Kenneth E. Westerman, Chirag J. Patel
Journal
Diabetologia
  • nutrition and metabolism
Author(s)
Alan Le Goallec, Sasha Collin, M'Hamed Jabri, Samuel Diai, Théo Vincent, Chirag J. Patel
Journal
PLOS Digital Health
Author(s)
Renhao Luo, Dena Zeraatkar, Maria Glymour, Randall J. Ellis, Hossein Estiri, Chirag J. Patel
Journal
BMC Medicine
  • brain
Author(s)
Alan Le Goallec, Samuel Diai, Sasha Collin, Jean-Baptiste Prost, Théo Vincent, Chirag J. Patel
Journal
Nature Communications

All publications